Resources

Found 80 Results

- Date
- Product
- Title
- Authors
- Type
- 2022
- ARES
- Validation and Application of Long-Read Whole-Genome Sequencing for Antimicrobial Resistance Gene Detection and Antimicrobial Susceptibility Testing
- Thomas Weinmaier, Rick Conzemius, Yehudit Bergman, Shawna Lewis, Emily B. Jacobs, Pranita D. Tamma, Arne Materna, Johannes Weinberger, Stephan Beisken, Patricia J. Simner
- Publication
- 2022
- ARES
- Clinical Utility of Routine Whole Genome Sequencing of AMR Pathogens in Healthcare Settings
- Arne Materna, Stephan Beisken, Johannes Weinberger, Ines Ferreira, Peter Majek , Lukas Lüftinger, Theo deVos
- Poster
- 2022
- ARES
- Metagenomic Antimicrobial Susceptibility Testing from Simulated Native Patient Samples
- Lukas Lüftinger, Arne Materna, Thomas Rattei, Stephan Beisken
- Poster
- 2022
- ARES
- Optimized Method for Bacterial Nucleic Acid Extraction from Positive Blood Culture Broth for Whole-Genome Sequencing, Resistance Phenotype Prediction, and Downstream Molecular Applications
- Michelle J. Bauer, Anna Maria Peri, Lukas Lüftinger, Stephan Beisken, Haakon Bergh, Brian M. Forde, Cameron Buckley, Thom Cuddihy, Patrice Tan, David L. Paterson, David M. Whiley, Patrick N. A. Harris
- Publication
- 2022
- ARES
- Core Genome Multilocus Sequence Typing and Antibiotic Susceptibility Prediction from Whole-Genome Sequence Data of Multidrug-Resistant Pseudomonas aeruginosa Isolates
- Scott A. Cunningham, Allison R. Eberly, Stephan Beisken, Andreas E. Posch, Audrey N. Schuetz, Robin Patel
- Publication
- 2022
- Unyvero
- Combining DRIP Score and Rapid Diagnostics For Improved Antibiotic Stewardship
- Richard Ramirez, BS; Alemu Fite, PhD; and Matthew Sims, MD, PhD, FACP, FIDSA
- Poster
- 2022
- ARES
- FED AMR – The role of free extracellular DNA in dissemination of antimicrobial resistance
- Webinar
- 2022
- ARES
- Automated antimicrobial susceptibility testing and antimicrobial resistance genotyping using Illumina and Oxford Nanopore Technologies sequencing data among Enterobacteriaceae
- Rick Conzemius, Yehudit Bergman, Peter Májek, Stephan Beisken, Shawna Lewis, Emily B. Jacobs, Pranita D. Tamma and Patricia J. Simner
- Publication
- 2022
- ARES
- Acinetobacter baumannii Genomic Sequence-Based Core Genome Multilocus Sequence Typing Using Ridom SeqSphere+ and Antimicrobial Susceptibility Prediction in ARESdb
- Madiha Fida, Scott A. Cunningham, Stephan Beisken, Andreas E. Posch, Nicholas Chia, Patricio R. Jeraldo, Matthew P. Murphy, Nicole M. Zinsmaster, Robin Patel, the Antibacterial Resistance Leadership Group
- Publication
- 2022
- Unyvero
- Evaluation of a pneumonia multiplex PCR panel for detection of bacterial respiratory tract pathogens from serial specimens collected from hospitalized COVID‑19 patients
- Chaitanya Tellapragada, Karin Andersson Ydsten, Anders Ternhag, Christian G. Giske
- Publication
- 2022
- Unyvero
- Fast multiplex bacterial PCR of bronchoalveolar lavage for antibiotic stewardship in hospitalised patients with pneumonia at risk of Gram-negative bacterial infection (Flagship II): a multicentre, randomised controlled trial
- Andrei M Darie, Nina Khanna, Kathleen Jahn, Michael Osthoff, Stefano Bassetti, Mirjam Osthoff, Desiree M Schumann, Werner C Albrich, Hans Hirsch, Martin Brutsche, Leticia Grize, Michael Tamm, Daiana Stolz
- Publication
- 2022
- ARES
- Combination of phage therapy and cefiderocol to successfully treat Pseudomonas aeruginosa cranial osteomyelitis
- Patricia J. Simner, Jerald Cherian, Gina A. Suh, Yehudit Bergman, Stephan Beisken, Joseph Fackler, Martin Lee, Robert J. Hopkins, Pranita D. Tamma
- Publication
- 2022
- ARES
- Beyond infection prevention and control: How genome sequencing of AMR pathogens can improve antibiotic stewardship and patient care
- Webinar
- 2022
- Acuitas
- Multicenter Evaluation of the Acuitas AMR Gene Panel for Detection of an Extended Panel of Antimicrobial Resistance Genes among Bacterial Isolates
- Patricia J. Simner, Kimberlee A. Musser, Kara Mitchell, Mark G. Wise, Shawna Lewis, Rebecca Yee, Yehudit Bergman, Caryn E. Good, Ayman M. Abdelhamed, Henry Li, Erin M. Laseman, Dan Sahm, Kelsey Pitzer, Julia Quan, G. Terrance Walker, Michael R. Jacobs, Daniel D. Rhoads
- Publication
- 2022
- ARES
- Applying Whole Genome Sequencing to Define and Predict Antimicrobial Resistance
- Webinar
- 2022
- Acuitas
- Discovering the FDA-cleared Acuitas AMR Gene Panel: Building a Case for Clinical Utility
- Webinar
- 2021
- ARES
- Surveillance and AI-Powered Prediction of AMR to Inform Antibiotic Therapy
- Webinar
- 2021
- ARES
- Study Introducing Best Practice Techniques for AI-powered Prediction of Antibiotic Susceptibility Testing by Next-Generation Sequencing
- Lukas Lüftinger, Peter Májek, Stephan Beisken, Thomas Rattei and Andreas E. Posch
- Publication
- 2021
- ARES
- Genomic and Phenotypic Analysis of Linezolid-Resistant Staphylococcus epidermidis in a Tertiary Hospital in Innsbruck, Austria
- Silke Huber, Miriam A. Knoll, Michael Berktold, Reinhard Würzner, Anita Brindlmayer, Viktoria Weber, Andreas E. Posch, Katharina Mrazek, Sarah Lepuschitz, Michael Ante, Stephan Beisken, Dorothea Orth-Höller, and Johannes Weinberger
- Publication
- 2021
- ARES
- Cefiderocol Activity against Clinical Pseudomonas aeruginosa Isolates Exhibiting Ceftolozane-Tazobactam Resistance
- Patricia J Simner, Stephan Beisken, Yehudit Bergman, Andreas E Posch, Sara E Cosgrove, Pranita D Tamma
- Publication
- 2021
- ARES
- Predictive Antibiotic Susceptibility Testing by Next-Generation Sequencing for Periprosthetic Joint Infections: Potential and Limitations
- Lukas Lüftinger, Ines Ferreira, Bernhard J. H. Frank, Stephan Beisken, Johannes Weinberger, Arndt von Haeseler, Thomas Rattei, Jochen G. Hofstaetter, Andreas E. Posch and Arne Materna
- Publication
- 2021
- ARES
- Culture-Free Detection of Antibiotic Resistance Markers from Native Patient Samples by Hybridization Capture Sequencing
- Ines Ferreira, Sarah Lepuschitz, Stephan Beisken, Giuseppe Fiume, Katharina Mrazek, Bernhard J. H. Frank, Silke Huber, Miriam A. Knoll, Arndt von Haeseler, Arne Materna, Jochen G. Hofstaetter, Andreas E. Posch and Johannes Weinberger
- Publication
- 2021
- ARES
- Core Genome Multi-Locus Sequence Typing and Prediction of Antimicrobial Susceptibility Using Whole Genome Sequences of Escherichia coli Bloodstream Infection Isolates
- Ritu Banerjee, Scott A. Cunningham, Stephan Beisken, Andreas E. Posch, Brian Johnston, James R. Johnson, and Robin Patel
- Publication
- 2021
- ARES
- Defining Baseline Mechanisms of Cefiderocol Resistance in the Enterobacterales
- Patricia J. Simner, Stephan Beisken, Yehudit Bergman, Michael Ante, Andreas E. Posch, and Pranita D. Tamma
- Publication
- 2021
- ARES
- Progressive Development of Cefiderocol Resistance in Escherichia coli During Therapy Is Associated with Increased blaNDM-5 Copy Number and Gene Expression
- Patricia J Simner, Heba H Mostafa, Yehudit Bergman, Michael Ante, Tsigereda Tekle, Ayomikun Adebayo, Stephan Beisken, Kathryn Dzintars, Pranita D Tamma
- Publication

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